The call
Govern Cline through the VS Code and JetBrains extensions.
Keep the CLI and Cline Desktop off machines that need enforced controls until Cline enforces them there, or cover those machines with endpoint policy.
Cline Enterprise's provider, MCP, and telemetry controls take effect only in the VS Code and JetBrains extensions; the CLI enforces rules and workflows, and Cline Desktop enforces none. Enterprise also adds SSO, role-based access, and audit logs. This checklist covers each setting and how to close the gaps.
When you need this
- Security asks how Cline is governed before a wider rollout.
- Model traffic must stay on approved providers.
- You need to limit which MCP servers engineers can connect.
- Engineers use the CLI or Cline Desktop alongside the IDE extension.
Evaluation criteria
Sign-in and roles
Do engineers sign in with corporate identity?
Look forSSO through WorkOS AuthKit with Okta, Microsoft Entra ID, Google Workspace, or generic SAML or OIDC, and the Member, Admin, and Owner roles. Members cannot switch to a personal account in the IDE extensions. Cline's Enterprise plan also lists SCIM provisioning.
Approved providers
Can engineers send code to a provider you have not approved?
Look forAllowed providers set in remote configuration: Cline, Amazon Bedrock, Google Vertex AI, Azure Foundry, Anthropic, OpenAI-compatible endpoints, or LiteLLM. Only the VS Code and JetBrains extensions enforce the list. In the CLI and Cline Desktop, members can choose other providers.
MCP servers
Which tools can the agent call?
Look forallowedMCPServers to allowlist local servers by ID, remoteMCPServers to push approved hosted servers, and blockPersonalRemoteMCPServers. Start with no auto-approved state-changing tools. Regulated teams that vet each server first can turn off the MCP marketplace, which also blocks local MCP servers. A developer in a regulated company contributed that setting in v3.4.5.
Telemetry and prompt data
What leaves the developer's machine?
Look forTelemetry is on by default and excludes code and prompts. The exception is the Cline and ClinePass providers, which receive prompts to run the model. Set the organization telemetry setting, then turn telemetry off on each machine that runs the CLI or Desktop, because both ignore the organization setting.
Workspace files
Will organization settings end up in Git?
Look forIgnore **/.cline/enterprise/ and **/.cline/remote-config/ in every repository. Cline writes the organization's settings there, and the copy can include the access keys for prompt storage.
Autonomy policy
Who may run Cline with every action auto-approved?
Look forA written YOLO-mode policy, enforced through review and endpoint policy. Cline documents a yoloModeAllowed setting, and its enforcement table lists no product that enforces it.
Questions to ask vendors
- When will the CLI and Cline Desktop enforce provider, MCP, and telemetry controls? If your rollout includes them, put the date in the order form.
- When will any Cline product enforce yoloModeAllowed?
- Which administrative actions does the audit log record, how long does Cline keep it, and can we export it? Cline's docs promise selective audit logging of administrative operations and keep a removed member's logs, but they name neither the actions nor the retention period.
- How does Cline handle prompt injection from files, web pages, or MCP results that try to exfiltrate secrets?
Red flags
- The rollout includes the CLI or Cline Desktop but relies on remote configuration for provider control.
- Repositories do not ignore the .cline/remote-config/ and .cline/enterprise/ folders.
- Auto-approve is broad on machines that hold production credentials.
- Nobody watches Cline's security advisories. A 2025 data-exfiltration report went more than 90 days without a fix after private disclosure. Cline published three advisories in 2026, including a critical WebSocket hijack in its Kanban server on May 8.
Products in this piece
Sources
- Official documentation
- 9
- Public source
- 3
- Cline docs: Cline Enterprise
- Cline docs: SSO setup
- Cline docs: Enterprise provider configuration
- Cline docs: MCP server controls
- Cline docs: YOLO mode controls
- Cline docs: Telemetry
- Cline pricing
- Embrace The Red: Cline: Vulnerable To Data Exfiltration And How To Protect Your Data (Aug 27, 2025)
- GitHub issue #1870: a regulated team asks to disable the MCP marketplace (Feb 20, 2025)
- Juan Torchia: Cline on Autopilot: Why I Put Limits on My Agent (Sep 2, 2026)
- Cline docs: Managing members
- Cline security advisories on GitHub